Exploring the Diversity of Arcobacter butzleri from Cattle in the UK Using MLST and Whole Genome Sequencing
Identifieur interne : 000228 ( Main/Exploration ); précédent : 000227; suivant : 000229Exploring the Diversity of Arcobacter butzleri from Cattle in the UK Using MLST and Whole Genome Sequencing
Auteurs : J. Yvette Merga [Royaume-Uni] ; Nicola J. Williams [Royaume-Uni] ; William G. Miller [États-Unis] ; Andrew J. H. Leatherbarrow [Royaume-Uni] ; Malcolm Bennett [Royaume-Uni] ; Neil Hall [Royaume-Uni] ; Kevin E. Ashelford [Royaume-Uni] ; Craig Winstanley [Royaume-Uni]Source :
- PLoS ONE [ 1932-6203 ] ; 2013.
Abstract
Url:
DOI: 10.1371/journal.pone.0055240
PubMed: 23405126
PubMed Central: 3566208
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Exploring the Diversity of <italic>Arcobacter butzleri</italic> from Cattle in the UK Using MLST and Whole Genome Sequencing</title><author><name sortKey="Merga, J Yvette" sort="Merga, J Yvette" uniqKey="Merga J" first="J. Yvette" last="Merga">J. Yvette Merga</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Institute of Infection and Global Health, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Williams, Nicola J" sort="Williams, Nicola J" uniqKey="Williams N" first="Nicola J." last="Williams">Nicola J. Williams</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Institute of Infection and Global Health, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Miller, William G" sort="Miller, William G" uniqKey="Miller W" first="William G." last="Miller">William G. Miller</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>Produce Safety and Microbiology Research Unit, U. S. Department of Agriculture, Albany, California, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Produce Safety and Microbiology Research Unit, U. S. 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Leatherbarrow</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Institute of Infection and Global Health, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Bennett, Malcolm" sort="Bennett, Malcolm" uniqKey="Bennett M" first="Malcolm" last="Bennett">Malcolm Bennett</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Institute of Infection and Global Health, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Hall, Neil" sort="Hall, Neil" uniqKey="Hall N" first="Neil" last="Hall">Neil Hall</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Advanced Genomics Facility, Institute of Integrative Biology, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Advanced Genomics Facility, Institute of Integrative Biology, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Ashelford, Kevin E" sort="Ashelford, Kevin E" uniqKey="Ashelford K" first="Kevin E." last="Ashelford">Kevin E. Ashelford</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Advanced Genomics Facility, Institute of Integrative Biology, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Advanced Genomics Facility, Institute of Integrative Biology, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Winstanley, Craig" sort="Winstanley, Craig" uniqKey="Winstanley C" first="Craig" last="Winstanley">Craig Winstanley</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Institute of Infection and Global Health, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">23405126</idno><idno type="pmc">3566208</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3566208</idno><idno type="RBID">PMC:3566208</idno><idno type="doi">10.1371/journal.pone.0055240</idno><date when="2013">2013</date><idno type="wicri:Area/Pmc/Corpus">000449</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000449</idno><idno type="wicri:Area/Pmc/Curation">000448</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000448</idno><idno type="wicri:Area/Pmc/Checkpoint">000196</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000196</idno><idno type="wicri:Area/Ncbi/Merge">000243</idno><idno type="wicri:Area/Ncbi/Curation">000243</idno><idno type="wicri:Area/Ncbi/Checkpoint">000243</idno><idno type="wicri:Area/Main/Merge">000229</idno><idno type="wicri:Area/Main/Curation">000228</idno><idno type="wicri:Area/Main/Exploration">000228</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Exploring the Diversity of <italic>Arcobacter butzleri</italic> from Cattle in the UK Using MLST and Whole Genome Sequencing</title><author><name sortKey="Merga, J Yvette" sort="Merga, J Yvette" uniqKey="Merga J" first="J. Yvette" last="Merga">J. Yvette Merga</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Institute of Infection and Global Health, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Williams, Nicola J" sort="Williams, Nicola J" uniqKey="Williams N" first="Nicola J." last="Williams">Nicola J. Williams</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Institute of Infection and Global Health, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Miller, William G" sort="Miller, William G" uniqKey="Miller W" first="William G." last="Miller">William G. Miller</name><affiliation wicri:level="2"><nlm:aff id="aff2"><addr-line>Produce Safety and Microbiology Research Unit, U. S. Department of Agriculture, Albany, California, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Produce Safety and Microbiology Research Unit, U. S. Department of Agriculture, Albany, California</wicri:regionArea><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Leatherbarrow, Andrew J H" sort="Leatherbarrow, Andrew J H" uniqKey="Leatherbarrow A" first="Andrew J. H." last="Leatherbarrow">Andrew J. H. Leatherbarrow</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Institute of Infection and Global Health, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Bennett, Malcolm" sort="Bennett, Malcolm" uniqKey="Bennett M" first="Malcolm" last="Bennett">Malcolm Bennett</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Institute of Infection and Global Health, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Hall, Neil" sort="Hall, Neil" uniqKey="Hall N" first="Neil" last="Hall">Neil Hall</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Advanced Genomics Facility, Institute of Integrative Biology, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Advanced Genomics Facility, Institute of Integrative Biology, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Ashelford, Kevin E" sort="Ashelford, Kevin E" uniqKey="Ashelford K" first="Kevin E." last="Ashelford">Kevin E. Ashelford</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Advanced Genomics Facility, Institute of Integrative Biology, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Advanced Genomics Facility, Institute of Integrative Biology, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author><author><name sortKey="Winstanley, Craig" sort="Winstanley, Craig" uniqKey="Winstanley C" first="Craig" last="Winstanley">Craig Winstanley</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Institute of Infection and Global Health, University of Liverpool, Liverpool</wicri:regionArea><wicri:noRegion>Liverpool</wicri:noRegion></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2013">2013</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><italic>Arcobacter butzleri</italic> is considered to be an emerging human foodborne pathogen. The completion of an <italic>A. butzleri</italic> genome sequence along with microarray analysis of 13 isolates in 2007 revealed a surprising amount of diversity amongst <italic>A. butzleri</italic> isolates from humans, animals and food. In order to further investigate <italic>Arcobacter</italic> diversity, 792 faecal samples were collected from cattle on beef and dairy farms in the North West of England. <italic>Arcobacter</italic> was isolated from 42.5% of the samples and the diversity of the isolates was investigated using multilocus sequence typing. An <italic>A. butzleri</italic> whole genome sequence, obtained by 454 shotgun sequencing of an isolate from a clinically-healthy dairy cow, showed a number of differences when compared to the genome of a human-derived <italic>A. butzleri</italic> isolate. PCR-based prevalence assays for variable genes suggested some tentative evidence for source-related distributions. We also found evidence for phenotypic differences relating to growth capabilities between our representative human and cattle isolates. 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Chuang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aziz, Rk" uniqKey="Aziz R">RK Aziz</name></author><author><name sortKey="Bartels, D" uniqKey="Bartels D">D Bartels</name></author><author><name sortKey="Best, Aa" uniqKey="Best A">AA Best</name></author><author><name sortKey="Dejongh, M" uniqKey="Dejongh M">M DeJongh</name></author><author><name sortKey="Disz, T" uniqKey="Disz T">T Disz</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Collado, L" uniqKey="Collado L">L Collado</name></author><author><name sortKey="Cleenwerck, I" uniqKey="Cleenwerck I">I Cleenwerck</name></author><author><name sortKey="Van Trappen, S" uniqKey="Van Trappen S">S Van Trappen</name></author><author><name sortKey="De Vos, P" uniqKey="De Vos P">P De Vos</name></author><author><name sortKey="Figueras, Mj" uniqKey="Figueras M">MJ Figueras</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Van Driessche, E" uniqKey="Van Driessche E">E van Driessche</name></author><author><name sortKey="Houf, K" uniqKey="Houf K">K Houf</name></author><author><name sortKey="Vangroenweghe, F" uniqKey="Vangroenweghe F">F Vangroenweghe</name></author><author><name sortKey="De Zutter, L" uniqKey="De Zutter L">L De Zutter</name></author><author><name sortKey="Van Hoof, J" uniqKey="Van Hoof J">J Van Hoof</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Hume, Me" uniqKey="Hume M">ME Hume</name></author><author><name sortKey="Harvey, Rb" uniqKey="Harvey R">RB Harvey</name></author><author><name sortKey="Stanker, Lh" uniqKey="Stanker L">LH Stanker</name></author><author><name sortKey="Droleskey, Re" uniqKey="Droleskey R">RE Droleskey</name></author><author><name sortKey="Poole, Tl" uniqKey="Poole T">TL Poole</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gonzalez, A" uniqKey="Gonzalez A">A Gonzalez</name></author><author><name sortKey="Ferrus, Ma" uniqKey="Ferrus M">MA Ferrus</name></author><author><name sortKey="Gonzalez, R" uniqKey="Gonzalez R">R Gonzalez</name></author><author><name sortKey="Hernandez, J" uniqKey="Hernandez J">J Hernandez</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Houf, K" uniqKey="Houf K">K Houf</name></author><author><name sortKey="De Zutter, L" uniqKey="De Zutter L">L De Zutter</name></author><author><name sortKey="Van Hoof, J" uniqKey="Van Hoof J">J Van Hoof</name></author><author><name sortKey="Vandamme, P" uniqKey="Vandamme P">P Vandamme</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Van Driessche, E" uniqKey="Van Driessche E">E van Driessche</name></author><author><name sortKey="Houf, K" uniqKey="Houf K">K Houf</name></author><author><name sortKey="Vangroenweghe, F" uniqKey="Vangroenweghe F">F Vangroenweghe</name></author><author><name sortKey="Nollet, N" uniqKey="Nollet N">N Nollet</name></author><author><name sortKey="De Zutter, L" uniqKey="De Zutter L">L De Zutter</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Alm, E" uniqKey="Alm E">E Alm</name></author><author><name sortKey="Huang, K" uniqKey="Huang K">K Huang</name></author><author><name sortKey="Arkin, A" uniqKey="Arkin A">A Arkin</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Royaume-Uni</li><li>États-Unis</li></country><region><li>Californie</li></region></list><tree><country name="Royaume-Uni"><noRegion><name sortKey="Merga, J Yvette" sort="Merga, J Yvette" uniqKey="Merga J" first="J. Yvette" last="Merga">J. Yvette Merga</name></noRegion><name sortKey="Ashelford, Kevin E" sort="Ashelford, Kevin E" uniqKey="Ashelford K" first="Kevin E." last="Ashelford">Kevin E. Ashelford</name><name sortKey="Bennett, Malcolm" sort="Bennett, Malcolm" uniqKey="Bennett M" first="Malcolm" last="Bennett">Malcolm Bennett</name><name sortKey="Hall, Neil" sort="Hall, Neil" uniqKey="Hall N" first="Neil" last="Hall">Neil Hall</name><name sortKey="Leatherbarrow, Andrew J H" sort="Leatherbarrow, Andrew J H" uniqKey="Leatherbarrow A" first="Andrew J. H." last="Leatherbarrow">Andrew J. H. Leatherbarrow</name><name sortKey="Williams, Nicola J" sort="Williams, Nicola J" uniqKey="Williams N" first="Nicola J." last="Williams">Nicola J. Williams</name><name sortKey="Winstanley, Craig" sort="Winstanley, Craig" uniqKey="Winstanley C" first="Craig" last="Winstanley">Craig Winstanley</name></country><country name="États-Unis"><region name="Californie"><name sortKey="Miller, William G" sort="Miller, William G" uniqKey="Miller W" first="William G." last="Miller">William G. Miller</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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